Comparative mitogenomics of Clitellata reveals mitogenome organization can affect the mode of phylogeny


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Mercan D., Horenkamp A., Aydemir M. N., Aydemir H. B., Neubıg K., Arslan N., ...Daha Fazla

TURKISH JOURNAL OF ZOOLOGY, cilt.49, sa.4, ss.197-206, 2025 (SCI-Expanded)

  • Yayın Türü: Makale / Tam Makale
  • Cilt numarası: 49 Sayı: 4
  • Basım Tarihi: 2025
  • Doi Numarası: 10.55730/1300-0179.3225
  • Dergi Adı: TURKISH JOURNAL OF ZOOLOGY
  • Derginin Tarandığı İndeksler: Science Citation Index Expanded (SCI-EXPANDED), Scopus, Academic Search Premier, BIOSIS, CAB Abstracts, Geobase, Veterinary Science Database, TR DİZİN (ULAKBİM)
  • Sayfa Sayıları: ss.197-206
  • Açık Arşiv Koleksiyonu: AVESİS Açık Erişim Koleksiyonu
  • Eskişehir Osmangazi Üniversitesi Adresli: Evet

Özet

Clitellata is a major clade of Annelida that includes almost all freshwater and terrestrial annelids as well as many marine

species. Aquatic oligochaetes include the union of the two multispecies families: Naididae and Tubificidae. There has been much debate

regarding the phylogeny and classification of the cosmopolitan and diverse Naididae. In this study, the total mitogenome sequences

of Potamothrix hammoniensis (Naididae: Tubificinae), Stylaria fossularis, Stylaria lacustris, Chaetogaster diaphanus, Chaetogaster

diaphanus sp. B, and Slavina appendiculata (Naididae: Naidinae) were sequenced and characterized and can be accessed from NCBI

under accession numbers OQ654101, PP909790, PP909791, PP909792, PP909793, and PP893275, respectively. For comparative analysis,

101 clitellate mitogenome sequences (from 70 oligochaetes and 31 hirudineans) were downloaded from NCBI. Comparative analysis

showed that nine anticodon-codon interactions do not have exact matches—a pattern consistent with the restriction of transcription

by mito-tRNAs. Within Clitellata, nine different gene order patterns were determined, and four of them were found in Naididae. This

suggests that mitochondrial gene order shows a cumulative effect in the evolution of mitogenome sequences. Based on phylogenetic

analysis, it appears that stronger support for Clitellata can be achieved with additional sequences. Additional sequences sampled from

several other families could be used for even more stability.